Determine daily percentiles
The function determines daily percentiles from data of a single CM SAF NetCDF input file.
daypctl( var, p = 0.95, infile, outfile, nc34 = 4, overwrite = FALSE, verbose = FALSE )
var |
Name of NetCDF variable (character). |
p |
Percentile number given as probability within [0, 1] (numeric). Default is 0.95. |
infile |
Filename of input NetCDF file. This may include the directory (character). |
outfile |
Filename of output NetCDF file. This may include the directory (character). |
nc34 |
NetCDF version of output file. If |
overwrite |
logical; should existing output file be overwritten? |
verbose |
logical; if TRUE, progress messages are shown |
A NetCDF file including a time series of daily percentiles is written.
## Create an example NetCDF file with a similar structure as used by CM ## SAF. The file is created with the ncdf4 package. Alternatively ## example data can be freely downloaded here: <https://wui.cmsaf.eu/> library(ncdf4) ## create some (non-realistic) example data lon <- seq(5, 15, 0.5) lat <- seq(45, 55, 0.5) time <- seq(ISOdate(2000, 1, 1), ISOdate(2000, 1, 6), "hours") origin <- as.Date("1983-01-01 00:00:00") time <- as.numeric(difftime(time, origin, units = "hour")) data <- array(250:350, dim = c(21, 21, 121)) ## create example NetCDF x <- ncdim_def(name = "lon", units = "degrees_east", vals = lon) y <- ncdim_def(name = "lat", units = "degrees_north", vals = lat) t <- ncdim_def(name = "time", units = "hours since 1983-01-01 00:00:00", vals = time, unlim = TRUE) var1 <- ncvar_def("SIS", "W m-2", list(x, y, t), -1, prec = "short") vars <- list(var1) ncnew <- nc_create(file.path(tempdir(),"CMSAF_example_file.nc"), vars) ncvar_put(ncnew, var1, data) ncatt_put(ncnew, "lon", "standard_name", "longitude", prec = "text") ncatt_put(ncnew, "lat", "standard_name", "latitude", prec = "text") nc_close(ncnew) ## Determine the 90% daily percentiles of the example CM SAF NetCDF file and ## write the output to a new file. daypctl(var = "SIS", p = 0.9, infile = file.path(tempdir(),"CMSAF_example_file.nc"), outfile = file.path(tempdir(),"CMSAF_example_file_daypctl.nc")) unlink(c(file.path(tempdir(),"CMSAF_example_file.nc"), file.path(tempdir(),"CMSAF_example_file_daypctl.nc")))
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