conos: getGlobalClusterMarkers – R documentation

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getGlobalClusterMarkers

Deprecated; Get markers for global clusters

Deprecated; Get markers for global clusters

getGlobalClusterMarkers(
  conos.obj,
  clustering = "multi level",
  min.samples.expressing = 0,
  min.percent.samples.expressing = 0
)

`conos.obj`	conos object
`clustering`	character Name of the clustering to use (default='multi level')
`min.samples.expressing`	numeric Minimum number of samples that must have the genes upregulated in the respective cluster (default=0)
`min.percent.samples.expression`	numeric Minumum percent of samples that must have the gene upregulated (default=0)

List of consistent genes per each cluster

Clustering on Network of Samples

v1.4.0

GPL-3

Authors

Viktor Petukhov [aut], Nikolas Barkas [aut], Peter Kharchenko [aut], Weiliang Qiu [ctb], Evan Biederstedt [aut, cre]

Initial release