conos: plotClusterBoxPlotsByAppType – R documentation

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plotClusterBoxPlotsByAppType

Generate boxplot per cluster of the proportion of cells in each celltype

Generate boxplot per cluster of the proportion of cells in each celltype

plotClusterBoxPlotsByAppType(
  conos.obj,
  clustering = NULL,
  apptypes = NULL,
  return.details = FALSE
)

`conos.obj`	conos object
`clustering`	name of the clustering to use (default=NULL)
`apptypes`	a factor specifying how to group the samples (default=NULL)
`return.details`	boolean If TRUE return a list with the plot and the summary data.frame (default=FALSE)

Boxplot per cluster of the proportion of cells in each celltype

Clustering on Network of Samples

v1.4.0

GPL-3

Authors

Viktor Petukhov [aut], Nikolas Barkas [aut], Peter Kharchenko [aut], Weiliang Qiu [ctb], Evan Biederstedt [aut, cre]

Initial release