easyPubMed: fetch_all_pubmed_ids – R documentation

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fetch_all_pubmed_ids

Retrieve All PubMed Record Identifiers Returned by a Query

Description

Retrieve PubMed record identifiers from Entrez following a search performed via the get_pubmed_ids() function. Identifiers are returned as a character vector.

Usage

fetch_all_pubmed_ids(pubmed_id_list)

Arguments

pubmed_id_list

List: the result of a get_pubmed_ids() call.

Details

Retrieve PubMed identifiers, without any other information (such as article title, authors, publication date, and so on). The PubMed IDs can be stored or used with other software.

Value

Character vector including all PMID (PubMed Identifiers) returned by the current query.

Author(s)

Damiano Fantini damiano.fantini@gmail.com

References

https://www.data-pulse.com/dev_site/easypubmed/

Examples

## Not run: 
## Fetch only PubMed Record IDs (PMIDs)
dami_query_string <- "Damiano Fantini[AU]"
dami_on_pubmed <- get_pubmed_ids(dami_query_string)
dami_pmids <- fetch_all_pubmed_ids(dami_on_pubmed)
print(dami_pmids)


## End(Not run)

easyPubMed

Search and Retrieve Scientific Publication Records from PubMed

v2.13

GPL-2

Authors

Damiano Fantini

Initial release

2019-03-25