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ecospat.testTree

Test Tree For The Ecospat package


Description

The tree object is a phylogenetic tree of class 'phylo' (see read.tree) that contains data of 50 angiosperm species from the Western Swiss Alps.

Format

ecospat.testTree is a tree contains the following species:

[1] "Rumex_acetosa" [2] "Polygonum_bistorta" [3] "Polygonum_viviparum" [4] "Rumex_crispus" [5] "Cerastium_latifolium" [6] "Silene_acaulis" [7] "Gypsophila_repens" [8] "Vaccinium_gaultherioides" [9] "Soldanella_alpina" [10] "Cruciata_laevipes" [11] "Galium_album" [12] "Galium_anisophyllon" [13] "Galium_megalospermum" [14] "Gentiana_verna" [15] "Gentiana_bavarica" [16] "Gentiana_purpurea" [17] "Gentiana_lutea" [18] "Bartsia_alpina" [19] "Rhinanthus_alectorolophus" [20] "Prunella_grandiflora" [21] "Acinos_alpinus" [22] "Plantago_alpina" [23] "Plantago_lanceolata" [24] "Veronica_officinalis" [25] "Veronica_aphylla" [26] "Veronica_alpina" [27] "Veronica_chamaedrys" [28] "Veronica_persica" [29] "Globularia_cordifolia" [30] "Globularia_nudicaulis" [31] "Myosotis_alpestris" [32] "Myosotis_arvensis" [33] "Aposeris_foetida" [34] "Centaurea_montana" [35] "Hieracium_lactucella" [36] "Leontodon_helveticus" [37] "Leontodon_autumnalis" [38] "Hypochaeris_radicata" [39] "Achillea_atrata" [40] "Achillea_millefolium" [41] "Homogyne_alpina" [42] "Senecio_doronicum" [43] "Adenostyles_glabra" [44] "Arnica_montana" [45] "Aster_bellidiastrum" [46] "Bellis_perennis" [47] "Doronicum_grandiflorum" [48] "Phyteuma_orbiculare" [49] "Phyteuma_spicatum" [50] "Campanula_rotundifolia"

Author(s)

Charlotte Ndiribe charlotte.ndiribe@unil.ch, Nicolas Salamin nicolas.salamin@unil.ch and Antoine Guisan antoine.guisan@unil.ch

References

Ndiribe, C., L. Pellissier, S. Antonelli, A. Dubuis, J. Pottier, P. Vittoz, A. Guisan and N. Salamin. 2013. Phylogenetic plant community structure along elevation is lineage specific. Ecology and Evolution, 3, 4925-4939.

Examples

fpath <- system.file("extdata", "ecospat.testTree.tre", package="ecospat")
tree <- read.tree(fpath)
plot(tree)

ecospat

Spatial Ecology Miscellaneous Methods

v3.2
GPL
Authors
Olivier Broennimann [cre, aut, ctb], Valeria Di Cola [aut, ctb], Blaise Petitpierre [ctb], Frank Breiner [ctb], Daniel Scherrer [ctb], Manuela D`Amen [ctb], Christophe Randin [ctb], Robin Engler [ctb], Wim Hordijk [ctb], Heidi Mod [ctb], Julien Pottier [ctb], Mirko Di Febbraro [ctb], Loic Pellissier [ctb], Dorothea Pio [ctb], Ruben Garcia Mateo [ctb], Anne Dubuis [ctb], Luigi Maiorano [ctb], Achilleas Psomas [ctb], Charlotte Ndiribe [ctb], Nicolas Salamin [ctb], Niklaus Zimmermann [ctb], Antoine Guisan [aut]
Initial release
2021-02-17

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