edgeR: validDGEList – R documentation

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validDGEList

Check for Valid DGEList object

Check for existence of standard components of DGEList object.

validDGEList(y)

`y`	`DGEList` object.

This function checks that the standard counts and samples components of a DGEList object are present.

DGEList with missing components added.

Gordon Smyth

counts <- matrix(rpois(4*2,lambda=5),4,2)
dge <- new("DGEList", list(counts=counts))
validDGEList(dge)

Empirical Analysis of Digital Gene Expression Data in R

v3.32.1

GPL (>=2)

Authors

Yunshun Chen, Aaron TL Lun, Davis J McCarthy, Matthew E Ritchie, Belinda Phipson, Yifang Hu, Xiaobei Zhou, Mark D Robinson, Gordon K Smyth

Initial release

2021-01-14