fasstr: plot_missing_dates – R documentation

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plot_missing_dates

Plot annual and monthly missing dates

Description

Plots the number of missing data for each month of each year. Calculates statistics from all values, unless specified. Data calculated using screen_flow_data() function. Returns a list of plots.

Usage

plot_missing_dates(
  data,
  dates = Date,
  values = Value,
  groups = STATION_NUMBER,
  station_number,
  roll_days = 1,
  roll_align = "right",
  water_year_start = 1,
  start_year,
  end_year,
  months = 1:12,
  include_title = FALSE
)

Arguments

`data`	Data frame of daily data that contains columns of dates, flow values, and (optional) groups (e.g. station numbers). Leave blank if using `station_number` argument.
`dates`	Name of column in `data` that contains dates formatted YYYY-MM-DD. Only required if dates column name is not 'Date' (default). Leave blank if using `station_number` argument.
`values`	Name of column in `data` that contains numeric flow values, in units of cubic metres per second. Only required if values column name is not 'Value' (default). Leave blank if using `station_number` argument.
`groups`	Name of column in `data` that contains unique identifiers for different data sets, if applicable. Only required if groups column name is not 'STATION_NUMBER'. Function will automatically group by a column named 'STATION_NUMBER' if present. Remove the 'STATION_NUMBER' column beforehand to remove this grouping. Leave blank if using `station_number` argument.
`station_number`	Character string vector of seven digit Water Survey of Canada station numbers (e.g. `"08NM116"`) of which to extract daily streamflow data from a HYDAT database. Requires `tidyhydat` package and a HYDAT database. Leave blank if using `data` argument.
`roll_days`	Numeric value of the number of days to apply a rolling mean. Default `1`.
`roll_align`	Character string identifying the direction of the rolling mean from the specified date, either by the first (`'left'`), last (`'right'`), or middle (`'center'`) day of the rolling n-day group of observations. Default `'right'`.
`water_year_start`	Numeric value indicating the month (`1` through `12`) of the start of water year for analysis. Default `1`.
`start_year`	Numeric value of the first year to consider for analysis. Leave blank to use the first year of the source data.
`end_year`	Numeric value of the last year to consider for analysis. Leave blank to use the last year of the source data.
`months`	Numeric vector of months to include in analysis (e.g. `6:8` for Jun-Aug). Leave blank to summarize all months (default `1:12`).
`include_title`	Logical value to indicate adding the group/station number to the plot, if provided. Default `FALSE`.

Value

A list of ggplot2 objects with the following for each station provided:

Missing_Dates

a plot that contains the number of missing dates for each year and month

Examples

# Run if HYDAT database has been downloaded (using tidyhydat::download_hydat())
if (file.exists(tidyhydat::hy_downloaded_db())) {

# Plot missing dates using a data frame and data argument with defaults
flow_data <- tidyhydat::hy_daily_flows(station_number = "08NM116")
plot_missing_dates(data = flow_data)

# Plot missing dates using station_number argument with defaults
plot_missing_dates(station_number = "08NM116")
                  
# Plot missing dates for water years starting in October
plot_missing_dates(station_number = "08NM116",
                   water_year_start = 9)
                  
# Plot missing dates for 7-day flows for July-September months only
plot_missing_dates(station_number = "08NM116",
                   roll_days = 7,
                   months = 7:9)
                   
}

fasstr

Analyze, Summarize, and Visualize Daily Streamflow Data

v0.3.2

Apache License 2.0

Authors

Jon Goetz [aut, cre] (<https://orcid.org/0000-0002-4993-1119>), Carl James Schwarz [aut], Robin Pike [ctb], Province of British Columbia [cph]

Initial release