fgsea: reactomePathways – R documentation

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reactomePathways

Returns a list of Reactome pathways for given Entrez gene IDs

Returns a list of Reactome pathways for given Entrez gene IDs

reactomePathways(genes)

genes

Entrez IDs of query genes.

A list of vectors with gene sets.

data(exampleRanks)
pathways <- reactomePathways(names(exampleRanks))

Fast Gene Set Enrichment Analysis

v1.16.0

MIT + file LICENCE

Authors

Gennady Korotkevich [aut], Vladimir Sukhov [aut], Nikolay Budin [ctb], Alexey Sergushichev [aut, cre]

Initial release