gMCP: matrix2graph – R documentation

Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!

matrix2graph

Matrix2Graph and Graph2Matrix

Creates a graph of class graphMCP from a given transition matrix or vice versa.

matrix2graph(m, weights = rep(1/dim(m)[1], dim(m)[1]))

graph2matrix(graph)

`m`	A transition matrix.
`weights`	A numeric for the initial weights.
`graph`	A graph of class `graphMCP`.

The hypotheses names are the row names or if these are NULL, the column names or if these are also NULL of type H1, H2, H3, ...

If the diagonal of the matrix is unequal zero, the values are ignored and a warning is given.

A graph of class graphMCP with the given transition matrix for matrix2graph. The transition matrix of a graphMCP graph for graph2matrix.

# Bonferroni-Holm:
m <- matrix(rep(1/3, 16), nrow=4)
diag(m) <- c(0, 0, 0, 0)
graph <- matrix2graph(m)
print(graph)
graph2matrix(graph)

Graph Based Multiple Comparison Procedures

v0.8-15

GPL (>= 2)

Authors

Kornelius Rohmeyer [aut, cre], Florian Klinglmueller [aut]

Initial release