gMCP: replaceVariables – R documentation

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replaceVariables

Replaces variables in a general graph with specified numeric values

Description

Given a list of variables and real values a general graph is processed and each variable replaced with the specified numeric value.

Usage

replaceVariables(graph, variables = list(), ask = TRUE, partial = FALSE,
  expand = TRUE, list = FALSE)

Arguments

`graph`	A graph of class `graphMCP` or class `entangledMCP`.
`variables`	A named list with one or more specified real values, for example `list(a=0.5, b=0.8, "tau"=0.5)` or `list(a=c(0.5, 0.8), b=0.8, "tau"=0.5)`. If `ask=TRUE` and this list is missing at all or single variables are missing from the list, the user is asked for the values (if the session is not interactive an error is thrown). For interactively entered values only single numbers are supported.
`ask`	If `FALSE` all variables that are not specified are not replaced.
`partial`	IF `TRUE` only specified variables are replaced and parameter `ask` is ignored.
`expand`	Used internally. Don't use yourself.
`list`	If `TRUE` the result will always be a list, even if only one graph is returned in this list.

Value

A graph or a matrix with variables replaced by the specified numeric values. Or a list of theses graphs and matrices if a variable had more than one value.

Author(s)

Kornelius Rohmeyer rohmeyer@small-projects.de

Examples

graph <- HungEtWang2010()
## Not run: 
replaceVariables(graph)

## End(Not run)
replaceVariables(graph, list("tau"=0.5,"omega"=0.5, "nu"=0.5))
replaceVariables(graph, list("tau"=c(0.1, 0.5, 0.9),"omega"=c(0.2, 0.8), "nu"=0.4))

gMCP

Graph Based Multiple Comparison Procedures

v0.8-15

GPL (>= 2)

Authors

Kornelius Rohmeyer [aut, cre], Florian Klinglmueller [aut]

Initial release