genBaRcode: error_correction_circlePlot – R documentation

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error_correction_circlePlot

Circle Plot

Description

creates a circle plot based on the additional data gathered by the error_correction function (EC_analysis needs to be set to TRUE). This function is intended to visualize the error correction procedure.

Usage

error_correction_circlePlot(edges, vertices)

Arguments

`edges`	a data frame containing edge definitions by two columns calles "from" and "to". Such data frame will be returned by the error_correction function with the EC_analysis parameter set to TRUE.
`vertices`	a data frame with at least one column containing a list of nodes (also returned by the error_correction function with the EC_analysis parameter set to TRUE)

Value

a ggplot2 object.

genBaRcode

Analysis and Visualization Tools for Genetic Barcode Data

v1.2.4

LGPL

Authors

Lars Thielecke <lars.thielecke@tu-dresden.de>

Initial release