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GermPercent

Germination percentage


Description

Compute the germination percentage or final germination percentage or germinability.

Usage

GermPercent(germinated.seeds, germ.counts, total.seeds, partial = TRUE)

Arguments

germinated.seeds

Number of germinated seeds

germ.counts

Germination counts at each time interval. Can be partial or cumulative as specified in the argument partial.

total.seeds

Total number of seeds.

partial

logical. If TRUE, germ.counts is considered as partial and if FALSE, it is considered as cumulative. Default is TRUE.

Details

Germination percentage is computed as follows (ISTA 2015).

Where, \(N_{g}\) is the number of germinated seeds and \(N_{t}\) is the total number of seeds.

The value of \(N_{g}\) can be either specified using the argument germinated.seeds or is computed from the germ.counts argument.

Value

The germination percentage (%) value.

References

ISTA (2015). “Chapter 5: The germination test.” International Rules for Seed Testing. International Seed Testing Association, Zurich, Switzerland., 2015, i–5.

Examples

x <- c(0, 0, 0, 0, 4, 17, 10, 7, 1, 0, 1, 0, 0, 0)
y <- c(0, 0, 0, 0, 4, 21, 31, 38, 39, 39, 40, 40, 40, 40)

# From partial germination counts
GermPercent(germ.counts = x, total.seeds = 50)

# From cumulative germination counts
GermPercent(germ.counts = y, total.seeds = 50, partial = FALSE)

# From number of germinated seeds
GermPercent(germinated.seeds = 40, total.seeds = 50)

germinationmetrics

Seed Germination Indices and Curve Fitting

v0.1.5
GPL-2 | GPL-3
Authors
J. Aravind [aut, cre] (<https://orcid.org/0000-0002-4791-442X>), S. Vimala Devi [aut], J. Radhamani [aut], Sherry Rachel Jacob [aut], Kalyani Srinivasan [aut], ICAR-NBGPR [cph] (www.nbpgr.ernet.in)
Initial release

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