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WeightGermPercent

Weighted germination percentage


Description

Compute the Weighted germination percentage \(WGP\) or Weighted germination index \(WGI\) (Reddy 1978; Reddy et al. 1985).

Usage

WeightGermPercent(germ.counts, total.seeds, intervals, partial = TRUE)

Arguments

germ.counts

Germination counts at each time interval. Can be partial or cumulative as specified in the argument partial.

total.seeds

Total number of seeds tested.

intervals

The time intervals.

partial

logical. If TRUE, germ.counts is considered as partial and if FALSE, it is considered as cumulative. Default is TRUE.

Details

Weighted germination percentage was calculated by giving maximum weight to the seeds that germinate first and decreasing weight to the seeds that germinate subsequently. It is computed as follows (Reddy 1978; Reddy et al. 1985).

Where, \(N_{i}\) is the number of seeds that germinated in the time interval \(i\) (not cumulative, but partial count), \(N\) is the total number of seeds tested, and \(k\) is the total number of time intervals.

Value

The weighted germination percentage (%) value.

References

Reddy LV (1978). Effect of temperature on seed dormancy and alpha-amylase activity during kernel maturation and germination in wheat (Triticum aestivum L.) cultivars. Ph.D. thesis, Oregon State University.

Reddy LV, Metzger RJ, Ching TM (1985). “Effect of temperature on seed dormancy of wheat.” Crop Science, 25(3), 455.

Examples

x <- c(0, 0, 0, 0, 4, 17, 10, 7, 1, 0, 1, 0, 0, 0)
y <- c(0, 0, 0, 0, 4, 21, 31, 38, 39, 39, 40, 40, 40, 40)
int <- 1:length(x)

# From partial germination counts
#----------------------------------------------------------------------------
WeightGermPercent(germ.counts = x, total.seeds = 50, intervals = int)

# From cumulative germination counts
#----------------------------------------------------------------------------
WeightGermPercent(germ.counts = y, total.seeds = 50, intervals = int,
                  partial = FALSE)

germinationmetrics

Seed Germination Indices and Curve Fitting

v0.1.5
GPL-2 | GPL-3
Authors
J. Aravind [aut, cre] (<https://orcid.org/0000-0002-4791-442X>), S. Vimala Devi [aut], J. Radhamani [aut], Sherry Rachel Jacob [aut], Kalyani Srinivasan [aut], ICAR-NBGPR [cph] (www.nbpgr.ernet.in)
Initial release

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