ggmsa: facet_msa – R documentation

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facet_msa

segment MSA

Description

The MSA would be plot in a field that you set.

Usage

facet_msa(field)

Arguments

field

a numeric vector of the field size.

Author(s)

Lang Zhou

Examples

library(ggplot2)
f <- system.file("extdata/sample.fasta", package="ggmsa")
# 2 fields
ggmsa(f, end = 120, font = NULL, color="Chemistry_AA") + facet_msa(field = 60)
# 3 fields
ggmsa(f, end = 120, font = NULL,  color="Chemistry_AA") + facet_msa(field = 40)

ggmsa

Plot Multiple Sequence Alignment using 'ggplot2'

v0.0.6

Artistic-2.0

Authors

Guangchuang Yu [aut, cre] (<https://orcid.org/0000-0002-6485-8781>), Lang Zhou [aut], Huina Huang [ctb]

Initial release