Box/Violin plots for group or condition comparisons in between-subjects designs.
A combination of box and violin plots along with jittered data points for between-subjects designs with statistical details included in the plot as a subtitle.
ggbetweenstats( data, x, y, plot.type = "boxviolin", type = "parametric", pairwise.comparisons = TRUE, pairwise.display = "significant", p.adjust.method = "holm", effsize.type = "unbiased", bf.prior = 0.707, bf.message = TRUE, results.subtitle = TRUE, xlab = NULL, ylab = NULL, caption = NULL, title = NULL, subtitle = NULL, k = 2L, var.equal = FALSE, conf.level = 0.95, nboot = 100L, tr = 0.2, centrality.plotting = TRUE, centrality.type = type, centrality.point.args = list(size = 5, color = "darkred"), centrality.label.args = list(size = 3, nudge_x = 0.4, segment.linetype = 4), outlier.tagging = FALSE, outlier.label = NULL, outlier.coef = 1.5, outlier.shape = 19, outlier.color = "black", outlier.label.args = list(size = 3), point.args = list(position = ggplot2::position_jitterdodge(dodge.width = 0.6), alpha = 0.4, size = 3, stroke = 0), violin.args = list(width = 0.5, alpha = 0.2), ggsignif.args = list(textsize = 3, tip_length = 0.01), ggtheme = ggplot2::theme_bw(), ggstatsplot.layer = TRUE, package = "RColorBrewer", palette = "Dark2", ggplot.component = NULL, output = "plot", ... )
data |
A dataframe (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted. |
x |
The grouping (or independent) variable from the dataframe |
y |
The response (or outcome or dependent) variable from the
dataframe |
plot.type |
Character describing the type of plot. Currently supported
plots are |
type |
A character specifying the type of statistical approach. Four possible options:
Corresponding abbreviations are also accepted: |
pairwise.comparisons |
Logical that decides whether pairwise comparisons
are to be displayed (default: |
pairwise.display |
Decides which pairwise comparisons to display. Available options are:
You can use this argument to make sure that your plot is not uber-cluttered when you have multiple groups being compared and scores of pairwise comparisons being displayed. |
p.adjust.method |
Adjustment method for p-values for multiple
comparisons. Possible methods are: |
effsize.type |
Type of effect size needed for parametric tests. The
argument can be |
bf.prior |
A number between |
bf.message |
Logical that decides whether to display Bayes Factor in
favor of the null hypothesis. This argument is relevant only for
parametric test (Default: |
results.subtitle |
Decides whether the results of statistical tests are
to be displayed as a subtitle (Default: |
xlab, ylab |
Labels for |
caption |
The text for the plot caption. |
title |
The text for the plot title. |
subtitle |
The text for the plot subtitle. Will work only if
|
k |
Number of digits after decimal point (should be an integer)
(Default: |
var.equal |
a logical variable indicating whether to treat the
two variances as being equal. If |
conf.level |
Scalar between |
nboot |
Number of bootstrap samples for computing confidence interval
for the effect size (Default: |
tr |
Trim level for the mean when carrying out |
centrality.plotting |
Logical that decides whether centrality tendency
measure is to be displayed as a point with a label (Default:
If you want default centrality parameter, you can specify this using
|
centrality.type |
Decides which centrality parameter is to be displayed.
The default is to choose the same as
Just as |
centrality.point.args, centrality.label.args |
A list of additional aesthetic
arguments to be passed to |
outlier.tagging |
Decides whether outliers should be tagged (Default:
|
outlier.label |
Label to put on the outliers that have been tagged. This
can't be the same as |
outlier.coef |
Coefficient for outlier detection using Tukey's method.
With Tukey's method, outliers are below (1st Quartile) or above (3rd
Quartile) |
outlier.shape |
Hiding the outliers can be achieved by setting
|
outlier.color |
Default aesthetics for outliers (Default: |
outlier.label.args |
A list of additional aesthetic arguments to be
passed to |
point.args |
A list of additional aesthetic arguments to be passed to
the |
violin.args |
A list of additional aesthetic arguments to be passed to
the |
ggsignif.args |
A list of additional aesthetic
arguments to be passed to |
ggtheme |
A function, |
ggstatsplot.layer |
Logical that decides whether |
package, palette |
Name of the package from which the given palette is to
be extracted. The available palettes and packages can be checked by running
|
ggplot.component |
A |
output |
Character that describes what is to be returned: can be
|
... |
Currently ignored. |
# to get reproducible results from bootstrapping set.seed(123) library(ggstatsplot) # simple function call with the defaults ggstatsplot::ggbetweenstats( data = mtcars, x = am, y = mpg, title = "Fuel efficiency by type of car transmission", caption = "Transmission (0 = automatic, 1 = manual)" ) # more detailed function call ggstatsplot::ggbetweenstats( data = datasets::morley, x = Expt, y = Speed, type = "nonparametric", plot.type = "box", xlab = "The experiment number", ylab = "Speed-of-light measurement", pairwise.comparisons = TRUE, p.adjust.method = "fdr", outlier.tagging = TRUE, outlier.label = Run, ggtheme = ggplot2::theme_grey(), ggstatsplot.layer = FALSE )
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