geom_balance
highlights the two direct descendant clades of an internal node
geom_balance( node, fill = "steelblue", color = "white", alpha = 0.5, extend = 0, extendto = NULL )
node |
selected node (balance) to highlight |
fill |
color fill |
color |
color to outline highlights and divide balance |
alpha |
alpha (transparency) |
extend |
extend xmax of the rectangle |
extendto |
extend xmax to extendto |
Particularly useful when studying neighboring clades. Note that balances that correspond to multichotomies will not be displayed.
ggplot2
Justin Silverman and modified by Guangchuang Yu
J. Silverman, et al. A phylogenetic transform enhances analysis of compositional microbiota data. (in preparation)
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