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options

Options for package hyperSpec Functions to access and set hyperSpec's options.


Description

Currently, the following options are defined:

Name Default Value (range) Description Used by
debuglevel 0 (1L 2L 3L) amount of debugging information produced spc.identify map.identify
various file import functions
spc.fit.poly.below
gc FALSE triggers frequent calling of gc () read.ENVI, new ("hyperSpec")
file.remove.emptyspc TRUE remove empty spectra directly on file import various file import functions
file.keep.name TRUE always create filename column various file import functions
tolerance sqrt (.Machine$double.eps) tolerance for numerical comparisons normalize01, file import: file.remove.emptyspc
wl.tolerance sqrt (.Machine$double.eps) tolerance for comparisons of the wavelength axis all.equal, collapse, rbind
plot.spc.nmax 25 number of spectra to be plotted by default plotspc
ggplot.spc.nmax 10 qplotspc

Usage

hy.getOptions(...)

hy.getOption(name)

hy.setOptions(...)

Arguments

...

hy.setOptions: pairs of argument names and values.

hy.getOptions: indices (or names) of the options.

name

the name of the option

Details

hy.setOptions will discard any values that were given without a name.

Value

hy.getOptions returns a list of all options
hy.setOptions invisibly returns a list with the options
hy.getOption returns the value of the requested option

Author(s)

C. Beleites

Examples

hy.getOptions ()

hyperSpec

Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)

v0.100.0
GPL (>= 3)
Authors
Claudia Beleites [aut, cre, dtc] (<https://orcid.org/0000-0003-1626-154X>), Valter Sergo [aut], Alois Bonifacio [ctb, dtc], Marcel Dahms [ctb], Björn Egert [ctb], Simon Fuller [ctb], Vilmantas Gegzna [ctb], Rustam Guliev [ctb], Bryan A. Hanson [ctb], Michael Hermes [ctb], Martin Kammer [dtc], Roman Kiselev [ctb], Sebastian Mellor [ctb]
Initial release
2021-09-13

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