Accessors for incidence_fit objects
Accessors for incidence_fit
objects
get_fit(x) ## S3 method for class 'incidence_fit' get_fit(x) ## S3 method for class 'incidence_fit_list' get_fit(x) get_info(x, what = "r", ...) ## S3 method for class 'incidence_fit' get_info(x, what = "r", ...) ## S3 method for class 'incidence_fit_list' get_info(x, what = "r", groups = NULL, na.rm = TRUE, ...)
x |
an |
what |
the name of the item in the "info" element of the |
... |
currently unused. |
groups |
if |
na.rm |
when |
a list of incidence_fit
objects.
if (require(outbreaks)) { withAutoprint({ dat <- ebola_sim$linelist$date_of_onset ## EXAMPLE WITH A SINGLE MODEL ## compute weekly incidence sex <- ebola_sim$linelist$gender i.sex <- incidence(dat, interval = 7, group = sex) ## Compute the optimal split for each group separately fits <- fit_optim_split(i.sex, separate_split = TRUE) ## `fits` contains an `incidence_fit_list` object fits$fit ## Grab the list of `incidence_fit` objects get_fit(fits$fit) ## Get the predictions for all groups get_info(fits$fit, "pred", groups = 1) ## Get the predictions, but set `groups` to "before" and "after" get_info(fits$fit, "pred", groups = 2) ## Get the reproduction number get_info(fits$fit, "r") ## Get the doubling confidence interval get_info(fits$fit, "doubling.conf") ## Get the halving confidence interval get_info(fits$fit, "halving.conf") })}
Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.