kangar00: gene_name_number-character-method – R documentation

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gene_name_number-character-method

Function to get genes names and numbers from kegg (for internal use)

Description

This function extracts for a particular pathway all genes and the numbers they are represented with in the KEGG network from the corresponding KGML pathway file.

Usage

## S4 method for signature 'character'
gene_name_number(x)

Arguments

`x`	A `character` hsa identifier of the pathway for which gene infomation should be extracted as used in KEGG database ('hsa00100').

Value

A data.frame listing the genes included in the pathway with their names as well as numbers used in KEGG database.

Author(s)

Stefanie Friedrichs, Patricia Burger

kangar00

Kernel Approaches for Nonlinear Genetic Association Regression

v1.4

GPL-2

Authors

Juliane Manitz [aut], Stefanie Friedrichs [aut], Patricia Burger [aut], Benjamin Hofner [aut], Ngoc Thuy Ha [aut], Saskia Freytag [ctb], Heike Bickeboeller [ctb]

Initial release

2020-02-12