maftools: write.mafSummary – R documentation

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write.mafSummary

Writes maf summaries to output tab-delimited text files.

Description

Writes maf summaries to output tab-delimited text files.

Usage

write.mafSummary(maf, basename = NULL)

Arguments

`maf`	an `MAF` object generated by `read.maf`
`basename`	basename for output file to be written.

Details

Writes MAF and related summaries to output files.

Value

None. Writes output as text files.

Examples

laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
write.mafSummary(maf = laml, basename = 'laml')

maftools

Summarize, Analyze and Visualize MAF Files

v2.6.05

MIT + file LICENSE

Authors

Anand Mayakonda [aut, cre] (<https://orcid.org/0000-0003-1162-687X>)

Initial release

2015-12-14