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qqTest

QQplot for Markov chains


Description

QQplot for Markov chains using an estimate of the Markov Chain CLT covariance matrix.

Usage

qqTest(mcse.obj)

Arguments

mcse.obj

the list returned by the mcse.multi or mcse.initseq command

Examples

library(mAr)
p <- 35
n <- 1e4
omega <- 5*diag(1,p)

## Making correlation matrix var(1) model
set.seed(100)
foo <- matrix(rnorm(p^2), nrow = p)
foo <- foo %*% t(foo)
phi <- foo / (max(eigen(foo)$values) + 1)
  
out <- as.matrix(mAr.sim(rep(0,p), phi, omega, N = n))

mcse.bm <- mcse.multi(x = out)
qqTest(mcse.bm)

mcse.isadj <- mcse.initseq(x = out, adjust = TRUE)
qqTest(mcse.isadj)

mcmcse

Monte Carlo Standard Errors for MCMC

v1.4-1
GPL (>= 2)
Authors
James M. Flegal <jflegal@ucr.edu>, John Hughes <j.hughes@ucdenver.edu>, Dootika Vats <dootika@iitk.ac.in>, and Ning Dai <daixx224@umn.edu>
Initial release
2020-01-29

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