meaRtools: aggregate_features – R documentation

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aggregate_features

Aggregate Feature Data

Description

Takes data from S object (MEA data structure) and makes a list of dataframes. Each dataframe corresponds to one feature, containing values for each well across each DIV of recording

Usage

aggregate_features(s, feat_type, parameters)

Arguments

`s`	MEA data structure
`feat_type`	Type of features (e.g. "spikes", "ns", "bursts")
`parameters`	A list of parameters, see data("parameters")

Value

A list of dataframes for a given set of features

Examples

data("S")
	data("parameters")
	s<-list()
	s[[1]]<-S
	spike_features = suppressWarnings( aggregate_features(s, "spike", parameters))
	ns_features = suppressWarnings( aggregate_features(s, "ns", parameters) )
	burst_features = suppressWarnings( aggregate_features(s, "burst", parameters) )

meaRtools

Micro-Electro Array (MEA) Analysis

v1.0.4

GPL (>= 3)

Authors

Quanli Wang [aut, ctb], Sahar Gelfman [aut, ctb, cre], Diana Hall [aut, ctb], Ryan Dhindsa [aut, ctb], Matt Halvorsen [aut, ctb], Ellese Cotterill [aut, ctb], Tom Edinburgh [aut, ctb], Stephen J. Eglen [aut, ctb, ths]

Initial release

2018-7-1