Filter wells
Filter out wells for which the number of active electrodes is less than 4, at least 70 percent of the time
filter_wells(unfiltered_df, nae,min_electrodes = 4, well_max_div_inactive_ratio = 0.5)
unfiltered_df |
Dataframe generated by the spike_features() function |
nae |
A dataframe containing the number of active electrodes for the recording |
min_electrodes |
Minimum number of active electrode to consider a well for analysis |
well_max_div_inactive_ratio |
The DIV inactive/active well ratio below which a well will be considered active for a set of DIVs |
A dataframe identical in format to the input, except that wells that do not meet the filtering criteria are removed.
data("S")
data("parameters")
s<-list(); s[[1]]<-S
spike_features<-aggregate_features(s, feat_type="spike", parameters )
nae = spike_features$nae
filtered.spike.features = lapply(spike_features, function(x) filter_wells(x, nae))Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.