mgcViz

Generic function for Accumulated Local Effect (ALE)

Create Accumulated Local Effects (ALE) for GAMs

Some diagnostics for a fitted gam model

Checking GAM simulated residuals or responses

Checking GAM residuals or responses along one covariate

Checking GAM residuals along two covariates

Getting the CDF of a gam family

Fit a GAM model and get a gamViz object

Fit a GAMM or GAMM4 model and get a gamViz object

Convert gamViz object to gamObject

Converting gam objects to gamViz objects

Plotting plotSmooth objects on a grid

Add boundaries to smooth effect plot

Adding confidence intervals to barplots

Adding confidence intervals to effect plot

Adding confidence band to effect plots

Cluster and plot smooth effects

Adding coordinate lines

Adding density estimate to a plot

Adding density estimate heatmap

Checking residuals conditional density

Adding barplot to effect plots

Adding fitted effect contour lines

Adding density strip of fitted effect

Add fitted smooth effect curve

Adding points representing the fitted effect

Adding raster representing the fitted effect

Adding glyphs to 2D plots

Binning and checking GAM residuals

Binning and checking GAM residuals

Checking sign of residuals along one covariate

Binning and checking QGAM residuals

Adding histogram to a plot

Add points to plot

Add polygons to effect plots

Adding contour of p-values

Adding raster or heat-map of p-values

Adding rug to margins of a plot

Add simulated smooth effect curves

Adding vertical line to a plot

Lists available layers for plotSmooth objects

Fit multiple QGAM models and get a mgamViz object

Plot 1D Accumulated Local Effects (ALE)

Plotting one dimensional smooth factor interactions

Basic GAM plotting

Plotting multiple quantile GAMs

Plotting one dimensional smooth effects

Plotting two dimensional smooth effects

Plotting slice of higher-dimensional smooth effects

Plotting Markov random field smooths

Plotting factor or logical parametric effects

Plotting parametric interactions

Plotting numeric parametric effects

Plotting random effects

Plotting smooths on the sphere

Generic plotting of differences

Plotting differences between two 1D smooth effects

Plotting differences between two 2D smooth effects

Plotting differences between two smooths on the sphere

Generic RGL plotting function

Visualizing 2D smooth effects in 3D

Visualizing a 2D slice of a smooth effects in 3D

Plotting sequence of slices of 2D smooth effect

Posterior simulation from a GAM object

Printing the output of check.gamViz

Printing the output of plot.gamViz

Printing plots of smooth effects

Printing the output of qq.gamViz

Extracting parametric effects from a GAM model

Fit a QGAM model and get a gamViz object

Generic QQ plots

QQ plots for gam model residuals

Quantile-Quantile Plots

Generalized Additive Model residuals

Generic shine function

Shiny QQ-plots for GAMs

Simulating responses from a GAM object

Extracting a smooth effect from a GAM model

Generic zooming function

Efficiently zooming on GAM QQ-plots

Constructing a decreasing function from (0,1) to (0,1)