mrgsolve: mrgsims_dplyr – R documentation

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mrgsims_dplyr

Methods for handling output with dplyr verbs

Description

These methods modify the data in a mrgsims object and return a data frame. Contrast with the functions in mrgsims_modify.

Usage

## S3 method for class 'mrgsims'
pull(.data, ...)

## S3 method for class 'mrgsims'
filter(.data, ...)

## S3 method for class 'mrgsims'
group_by(.data, ..., add = FALSE, .add = FALSE)

## S3 method for class 'mrgsims'
distinct(.data, ..., .keep_all = FALSE)

## S3 method for class 'mrgsims'
mutate(.data, ...)

## S3 method for class 'each'
summarise(.data, funs, ...)

## S3 method for class 'mrgsims'
summarise(.data, ...)

## S3 method for class 'mrgsims'
do(.data, ..., .dots)

## S3 method for class 'mrgsims'
select(.data, ...)

## S3 method for class 'mrgsims'
slice(.data, ...)

as_data_frame.mrgsims(.data_, ...)

## S3 method for class 'mrgsims'
as_tibble(.data_, ...)

as.tbl.mrgsims(x, ...)

Arguments

`.data`	an mrgsims object; passed to various `dplyr` functions
`...`	passed to other methods
`add`	passed to dplyr::group_by (for dplyr < `1.0.0`)
`.add`	passed to dplyr::group_by (for dplyr >= `1.0.0`)
`.keep_all`	passed to dplyr::distinct
`funs`	passed to dplyr::summarise_each
`.dots`	passed to various `dplyr` functions
`.data_`	mrgsims object
`x`	passed to dplyr::as.tbl

Details

For the select_sims function, the dots ... must be either compartment names or variables in $CAPTURE. An error will be generated if no valid names are selected or the names for selection are not found in the simulated output.

Examples

out <- mrgsim(house(), events = ev(amt = 100), end = 5, delta=1)

dplyr::filter(out, time==2)

dplyr::mutate(out, label = "abc")

dplyr::select(out, time, RESP, CP)

mrgsolve

Simulate from ODE-Based Models

v0.11.1

GPL (>= 2)

Authors

Kyle T Baron [aut, cre] (<https://orcid.org/0000-0001-7252-5656>), Bill Gillespie [ctb], Charles Margossian [ctb], Devin Pastoor [ctb], Bill Denney [ctb] (<https://orcid.org/0000-0002-5759-428X>), Dilawar Singh [ctb], Felicien Le Louedec [ctb] (<https://orcid.org/0000-0003-3699-2729>), Timothy Waterhouse [ctb] (<https://orcid.org/0000-0002-0954-9660>), Metrum Research Group [cph]

Initial release