protti: plot_pval_distribution – R documentation

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plot_pval_distribution

Plot histogram of p-value distribution

Plots the distribution of p-values derived from any statistical test as a histogram.

plot_pval_distribution(data, grouping, pval)

`data`	a data frame containing at least grouping identifiers (precursor, peptide or protein) and p-values derived from any statistical test.
`grouping`	the column in the data frame containing either precursor, peptide or protein identifiers.
`pval`	the column in the data frame containing p-values.

A histogram or boxplot that shows the intensity distribution over all samples or by sample.

## Not run: 
plot_pval_distribution(
  data,
  grouping = eg_precursor_id,
  pval = pval
)

## End(Not run)

Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools

v0.1.1

MIT + file LICENSE

Authors

Jan-Philipp Quast [aut, cre], Dina Schuster [aut], ETH Zurich [cph, fnd]

Initial release