Useful functions and workflows for proteomics quality control and data analysis of both limited proteolysis-coupled mass spectrometry (LiP-MS) (Feng et. al. (2014) <doi:10.1038/nbt.2999>) and regular bottom-up proteomics experiments. Data generated with search tools such as 'Spectronaut', 'MaxQuant' and 'Proteome Discover' can be easily used due to flexibility of functions.

Bottom-Up Proteomics and LiP-MS Quality Control and Data
Analysis Tools

package-ubuntu-20.04-r-4.0.5#cran#protti-0.1.1

<p>A colour scheme for protti that contains 100 colours.
</p>

package-ubuntu-20.04-r-4.0.5#cran#protti-0.1.1#docs#protti_colours

protti_colours

Description

Usage

Format

Source

protti

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