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R
qtl

find_large_intervals

Find large intervals in a map

Description

Find large inter-marker intervals in a map.

Usage

find_large_intervals(map, min_length=35)

Arguments

map

A list of numeric vectors; each component is a chromosome with the positions of markers on that chromosome. Can also be an object of class cross, in which case pull.map is used.
min_length

Minimum length of interval to be flagged.

Value

Data frame with chromosome, left and right markers and interval length.

Author(s)

Karl W Broman, broman@wisc.edu

See Also

Examples

data(fake.f2)

find_large_intervals(fake.f2, 30)
qtl

Tools for Analyzing QTL Experiments

v1.48-1
GPL-3
Authors
Karl W Broman <broman@wisc.edu> and Hao Wu, with ideas from Gary Churchill and Saunak Sen and contributions from Danny Arends, Robert Corty, Timothee Flutre, Ritsert Jansen, Pjotr Prins, Lars Ronnegard, Rohan Shah, Laura Shannon, Quoc Tran, Aaron Wolen, Brian Yandell, and R Core Team
Initial release
2021-03-24

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