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plot.scanoneboot

Plot results of bootstrap for QTL position


Description

Plot a histogram of the results of a nonparametric bootstrap to assess uncertainty in QTL position.

Usage

## S3 method for class 'scanoneboot'
plot(x, ...)

Arguments

x

An object of class "scanoneboot", as output by scanoneboot.

...

Passed to the function hist when it is called.

Details

The function plots a histogram of the bootstrap results obtained by scanoneboot. Genetic marker locations are displayed by vertical lines at the bottom of the plot.

Value

None.

Author(s)

Karl W Broman, broman@wisc.edu

See Also

Examples

data(fake.f2)
fake.f2 <- calc.genoprob(fake.f2, step=1)

## Not run: out.boot <- scanoneboot(fake.f2, chr=13, method="hk")


summary(out.boot)
plot(out.boot)

qtl

Tools for Analyzing QTL Experiments

v1.48-1
GPL-3
Authors
Karl W Broman <broman@wisc.edu> and Hao Wu, with ideas from Gary Churchill and Saunak Sen and contributions from Danny Arends, Robert Corty, Timothee Flutre, Ritsert Jansen, Pjotr Prins, Lars Ronnegard, Rohan Shah, Laura Shannon, Quoc Tran, Aaron Wolen, Brian Yandell, and R Core Team
Initial release
2021-03-24

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