Pull out the genotype imputations from a cross
Pull out the results of sim.geno from a cross as an array.
pull.draws(cross, chr)
cross |
An object of class |
chr |
Optional vector indicating the chromosomes to consider.
This should be a vector of character strings referring to chromosomes
by name; numeric values are converted to strings. Refer to
chromosomes with a preceding |
An array containing numeric indicators of the imputed genotypes. Multiple chromosomes are pasted together. The dimensions are individuals by positions by imputations
Karl W Broman, broman@wisc.edu
data(listeria) listeria <- sim.geno(listeria, step=5, stepwidth="max", n.draws=8) dr <- pull.draws(listeria, chr=c(5,13)) dr[1:20,1:10,1]
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