Summary of fit of qtl model
Print summary information about the results of fitqtl.
## S3 method for class 'fitqtl' summary(object, pvalues=TRUE, simple=FALSE, ...)
object |
Output from |
pvalues |
If FALSE, don't include p-values in the summary. |
simple |
If TRUE, don't include p-values or sums of squares in the summary. |
... |
Ignored at this point. |
An object of class summary.fitqtl, which is not all that
different than the input, but when printed gives summary information
about the results.
Hao Wu; Karl W Broman, broman@wisc.edu
data(fake.f2)
# take out several QTLs and make QTL object
qc <- c(1, 8, 13)
qp <- c(26, 56, 28)
fake.f2 <- subset(fake.f2, chr=qc)
fake.f2 <- calc.genoprob(fake.f2, step=2, err=0.001)
qtl <- makeqtl(fake.f2, qc, qp, what="prob")
# fit model with 3 interacting QTLs interacting
# (performing a drop-one-term analysis)
lod <- fitqtl(fake.f2, pheno.col=1, qtl, formula=y~Q1*Q2*Q3,
method="hk")
summary(lod)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.