Read QTL data from files
Read QTL data from a set of files
read_cross2(file, quiet = TRUE)
A control file in YAML or JSON format contains information about basic parameters as well as the names of the series of data files to be read. See the sample data files and the vignette describing the input file format.
Object of class "cross2"
. For details, see the
R/qtl2 developer guide.
read_pheno()
, write_control_file()
,
sample data files at https://kbroman.org/qtl2/pages/sampledata.html
and https://github.com/rqtl/qtl2data
## Not run: yaml_file <- "https://kbroman.org/qtl2/assets/sampledata/grav2/grav2.yaml" grav2 <- read_cross2(yaml_file) ## End(Not run) zip_file <- system.file("extdata", "grav2.zip", package="qtl2") grav2 <- read_cross2(zip_file)
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