Scale kinship matrix
Scale kinship matrix to be like a correlation matrix.
scale_kinship(kinship)
kinship |
A kinship matrix, or a list of such in the case of
the "leave one chromosome out" method, as calculated by
|
We take cij = kij / √(kii kjj)
A matrix or list of matrices, as with the input, but with the matrices scaled to be like correlation matrices.
grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2"))
map <- insert_pseudomarkers(grav2$gmap, step=1)
probs <- calc_genoprob(grav2, map, error_prob=0.002)
K <- calc_kinship(probs)
Ka <- scale_kinship(K)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.