Retrieve Results of a finished Enrichment Analysis from miEAA
After your submitted enrichment analysis request has finished (check
using rba_mieaa_enrich_status), you can retrieve the results
using this function.
rba_mieaa_enrich_results(job_id, sort_by = "p_adjusted", sort_asc = TRUE, ...)
job_id |
The job-id (a character string) of a submitted enrichment analysis. |
sort_by |
A column name to the result's table based on that. one of: "category", "subcategory", "enrichment", "p_value", "p_adjusted" (default), "q_value" or "observed" . |
sort_asc |
(logical) If TRUE, the results will be sorted in ascending order. If FALSE, the results will be sorted in descending order. |
... |
rbioapi option(s). Refer to |
Note that using rba_mieaa_enrich is a more convenient way to
automatically perform this and other required function calls to enrich
your input miRNA-set using miEAA.
A data frame with your enrichment analysis results.
"GET https://ccb-compute2.cs.uni-saarland.de/mieaa2/api/v1/results/job_id"
Fabian Kern, Tobias Fehlmann, Jeffrey Solomon, Louisa Schwed, Nadja Grammes, Christina Backes, Kendall Van Keuren-Jensen, David Wesley Craig,Eckart Meese, Andreas Keller, miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems, Nucleic Acids Research, Volume 48, Issue W1, 02 July 2020, Pages W521–W528, https://doi.org/10.1093/nar/gkaa309
Other "miEAA":
rba_mieaa_cats(),
rba_mieaa_convert_type(),
rba_mieaa_convert_version(),
rba_mieaa_enrich_status(),
rba_mieaa_enrich_submit(),
rba_mieaa_enrich()
## Not run:
rba_mieaa_enrich_results("f52d1aef-6d3d-4d51-9020-82e68fe99012")
## End(Not run)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.