Map Cross References IDs to Reactome ReferenceEntity
Use this function To retrieve a list of Reactome ReferenceEntity associated to your provided Cross Reference (i.e. External) ID.
rba_reactome_xref(xref_id, ...)
xref_id |
molecule's cross-reference (external) identifier. |
... |
rbioapi option(s). Refer to |
Reactome cross-references external database's identifiers to it's database
Entries named ReferenceEntity, which resembles the invariant aspect of
a molecule. Thus there is a one-to-many relationship between Reactome's
ReferenceEntity object and the molecule's ID in external databases,
which in Reactome's terms is called Cross Reference.
Refer to rba_reactome_participants's "Details section"
to learn more about how Reactome classifies molecules.
List containing the ReferenceEntity corresponding to your provided cross-reference (external) ID.
"GET https://reactome.org/ContentService/references/mapping/identifier"
Jassal B, Matthews L, Viteri G, Gong C, Lorente P, Fabregat A, Sidiropoulos K, Cook J, Gillespie M, Haw R, Loney F, May B, Milacic M, Rothfels K, Sevilla C, Shamovsky V, Shorser S, Varusai T, Weiser J, Wu G, Stein L, Hermjakob H, D'Eustachio P. The reactome pathway knowledgebase. Nucleic Acids Res. 2020 Jan 8;48(D1):D498-D503. doi: 10.1093/nar/gkz1031. PubMed PMID: 31691815.
rba_reactome_xref("CD40")
rba_reactome_xref("ENSP00000361350")Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.