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ricu

Intensive Care Unit Data with R

Focused on (but not exclusive to) data sets hosted on PhysioNet (<https://physionet.org>), 'ricu' provides utilities for download, setup and access of intensive care unit (ICU) data sets. In addition to functions for running arbitrary queries against available data sets, a system for defining clinical concepts and encoding their representations in tabular ICU data is presented.

Functions (32)

Data attach utilities

callback_cncpt

Concept callback functions

callback_int

Internal item callback utilities

callback_itm

Item callback utilities

callback_sofa

SOFA score label

Switch between id types

concept_dictionary

Load concept dictionaries

data_concepts

Data Concepts

ICU datasets

data_export

Read and write utilities

Data items

Data loading utilities

Difftime utilities

Data download utilities

File system utilities

Tabular ICU data classes

Data import utilities

Internal utilities for item/concept objects

load_concepts

Load concept data

Low level functions for loading data

load_src_cfg

Load configuration for a data source

Load data as id_tbl or ts_tbl objects

msg_progress

Message signaling nested with progress reporting

ricu-package

ricu: Intensive Care Unit Data with R

Internal utilities for working with data source configurations

stay_windows

Stays

tbl_internal

Internal utilities for ICU data objects

ICU class meta data utilities

tbl_reshape

ICU class data reshaping

ICU class data utilities

Time series utility functions

Utility functions

ricu

Intensive Care Unit Data with R

v0.1.3

GPL-3

Authors

Nicolas Bennett [aut, cre], Drago Plecko [aut], Ida-Fong Ukor [aut]

Initial release

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