rliger: convertOldLiger – R documentation

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convertOldLiger

Convert older liger object into most current version (based on class definition)

Description

Also works for Analogizer objects (but must have both liger and Analogizer loaded). Transfers data in slots with same names from old class object to new, leaving slots defined only in new class NULL.

Usage

convertOldLiger(object, override.raw = FALSE, verbose = TRUE)

Arguments

`object`	`liger` object.
`override.raw`	Keep original raw.data without any modifications (removing missing cells etc.) (defualt FALSE).
`verbose`	Print progress bar/messages (TRUE by default)

Value

Updated liger object.

Examples

## Not run: 
# analogy (old Analogizer object)
# convert to latest class definition
ligerex <- convertOldLiger(analogy)

## End(Not run)

rliger

Linked Inference of Genomic Experimental Relationships

v1.0.0

GPL-3

Authors

Joshua Welch [aut, ctb], Chao Gao [aut, ctb, cre], Jialin Liu [aut, ctb], Joshua Sodicoff [aut, ctb], Velina Kozareva [aut, ctb], Evan Macosko [aut, ctb], Paul Hoffman [ctb], Ilya Korsunsky [ctb], Robert Lee [ctb]

Initial release

2021-04-18