Construct a liger object organized by another feature
Using the same data, rearrange functional datasets using another discrete feature in cell.data. This removes most computed data slots, though cell.data and current clustering can be retained.
reorganizeLiger( object, by.feature, keep.meta = TRUE, new.label = "orig.dataset", ... )
object |
|
by.feature |
Column in cell.data to use in reorganizing raw data. |
keep.meta |
Whether to carry over all existing data in cell.data slot (default TRUE). |
new.label |
If cell.data is to be retained, new column name for original organizing feature (previously labeled as dataset) (default "orig.dataset") |
... |
Additional parameters passed on to createLiger. |
liger object with rearranged raw.data slot.
## Not run: # ligerex (liger object based on in-memory objects) organized by species # with column designating sex in cell.data # rearrange by sex ligerex_new <- reorganizeLiger(ligerex, by.feature = "sex", new.label = "species") ## End(Not run)
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