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restoreOnlineLiger

Restore links (to hdf5 files) for reloaded online Liger object


Description

When loading the saved online Liger object in a new R session, the links to hdf5 files may be corrupted. This functions enables the restoration of those links so that new analyses can be carried out.

Usage

restoreOnlineLiger(object, file.path = NULL)

Arguments

object

liger object.

file.path

List of paths to hdf5 files.

Value

liger object with restored links.

Examples

## Not run: 
# We want to restore the ligerex (liger object based on HDF5 files)
# It has broken connections to HDF5 files
# Call the following function and provide the paths to the correspoinding files
ligerex = restoreOnlineLiger(ligerex, file.path = list("path1/library1.h5", "path2/library2.h5"))

## End(Not run)

rliger

Linked Inference of Genomic Experimental Relationships

v1.0.0
GPL-3
Authors
Joshua Welch [aut, ctb], Chao Gao [aut, ctb, cre], Jialin Liu [aut, ctb], Joshua Sodicoff [aut, ctb], Velina Kozareva [aut, ctb], Evan Macosko [aut, ctb], Paul Hoffman [ctb], Ilya Korsunsky [ctb], Robert Lee [ctb]
Initial release
2021-04-18

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