Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!
Get Started for Free

tested

Tested method for (O)PLS models


Description

Returns predictions of the (O)PLS(-DA) model on the out of the box samples (when a 'subset' of samples has been selected when training the model)

Usage

tested(object, ...)

## S4 method for signature 'opls'
tested(object)

Arguments

object

An S4 object of class opls, created by opls function.

...

Currently not used.

Value

Predictions (either a vector, factor, or matrix depending on the y response used for training the model)

Author(s)

Etienne Thevenot, etienne.thevenot@cea.fr

Examples

data(sacurine)
attach(sacurine)

testedorMN <- dataMatrix
responseFc <- sampleMetadata[, "gender"]

sacurine.plsda <- opls(testedorMN,
                       responseFc,
                       subset = "odd")

trainVi <- getSubsetVi(sacurine.plsda)

table(responseFc[trainVi], fitted(sacurine.plsda))

detach(sacurine)

ropls

PCA, PLS(-DA) and OPLS(-DA) for multivariate analysis and feature selection of omics data

v1.22.0
CeCILL
Authors
Etienne A. Thevenot <etienne.thevenot@cea.fr>
Initial release
2020-03-05

We don't support your browser anymore

Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.