sccore: graphToAdjList – R documentation

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graphToAdjList

Convert igraph graph into an adjacency list

Description

Convert igraph graph into an adjacency list

Usage

graphToAdjList(graph)

Arguments

graph

input igraph object

Value

adjacency list, defined by list(idx=adj.list, probabilities=probs, names=edge.list.fact$levels

Examples

library(dplyr)
edge.list.fact <- igraph::as_edgelist(conosGraph) %>% as_factor()
edge.list <- matrix(edge.list.fact$values, ncol=2)
n.nodes <- length(igraph::V(conosGraph))
splitVectorByNodes(edge.list[,1], edge.list[,2], n.nodes)

sccore

Core Utilities for Single-Cell RNA-Seq

v0.1.3

GPL-3

Authors

Viktor Petukhov [aut], Ramus Rydbirk [aut], Peter Kharchenko [aut], Evan Biederstedt [aut, cre]

Initial release