Label propagation
Label propagation
propagate_labels( edge_verts, edge_weights, vert_labels, max_n_iters = 10L, verbose = TRUE, diffusion_fading = 10, diffusion_fading_const = 0.5, tol = 0.005, fixed_initial_labels = FALSE )
edge_verts |
edge vertices of igraph graph object |
edge_weights |
edge weights of igraph graph object |
vert_labels |
vector of factor or character labels, named by cell names |
max_n_iters |
integer Maximal number of iterations (default=10) |
verbose |
boolean Verbose mode (default=TRUE) |
diffusion_fading |
numeric Constant used for diffusion on the graph, exp(-diffusion.fading * (edge_length + diffusion.fading.const)) (default=10.0) |
diffusion_fading_const |
numeric Another constant used for diffusion on the graph, exp(-diffusion.fading * (edge_length + diffusion.fading.const)) (default=0.5) |
tol |
numeric Absolute tolerance as a stopping criteria (default=5e-3) |
fixed_initial_labels |
boolean Prohibit changes of initial labels during diffusion (default=FALSE) |
matrix from input graph, with labels propagated
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