Multi-generational pedigree inference from incomplete data on
hundreds of SNPs, including parentage assignment and sibship clustering.
See Huisman (2017) (<DOI:10.1111/1755-0998.12665>) for more information.

Pedigree Inference from SNPs

package-ubuntu-20.04-r-4.0.5#cran#sequoia-2.3.3

<p>Wrapper for Fortran function to simulate genotyping errors.
</p>

<table summary="R argblock">
<tr valign="top">
<td><code>SGeno</code></td>
<td>
<p>matrix with genotype data, size nInd x nSnp.</p>
</td>
</tr>
<tr valign="top">
<td><code>RealToObs</code></td>
<td>
<p>array with conditional probability of observing genotype i
conditional on actual genotype j, size nSnp x 3 x 3.</p>
</td>
</tr>
</table>

package-ubuntu-20.04-r-4.0.5#cran#sequoia-2.3.3#docs#DoErrors

DoErrors

Description

Usage

Arguments

Value

sequoia

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`SGeno`	matrix with genotype data, size nInd x nSnp.
`RealToObs`	array with conditional probability of observing genotype i conditional on actual genotype j, size nSnp x 3 x 3.