sequoia: plot.seq – R documentation

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plot.seq

Plot Summary Overview of sequoia Output

visualise the numbers of assigned parents, sibship sizes, and parental LLRs

## S3 method for class 'seq'
plot(SeqSum, Pedigree, Panels = "all")

`SeqSum`	list output from `SummarySeq`.
`Pedigree`	dataframe with at least id, dam and sire in columns 1-3, respectively. If columns with parental LLRs and/or Mendelian errors are present, these will be plotted as well.
`Panels`	character vector with panel(s) to plot. Choose from 'all', 'G.parents', 'D.parents', 'sibships', 'LLR', 'OH'.

Pedigree Inference from SNPs

v2.3.3

GPL-2

Authors

Jisca Huisman [aut, cre]

Initial release

2021-04-30