Generate plot of TMA point process
This function generates plot of point process in rectangular or circular window.
plot_immunoflo( mif, plot_title, mnames, mlabels = NULL, mcolors = NULL, dark_mode = FALSE, cell_type = NULL, filename = NULL, path = NULL )
mif |
MIF object created using create_MIF(). |
plot_title |
Character string or vector of character strings of variable name(s) to serve as plot title(s). |
mnames |
Character vector containing marker names. |
mlabels |
Character vector of label for marker names to display in plot legend. |
mcolors |
Character vector of color names to display markers in the plot. |
dark_mode |
Plot using dark color scheme |
cell_type |
Character vector of cell type ??? |
filename |
Character string of file name to store plots. Plots are generated as single .pdf file. |
path |
Different path than file name or to use in conjunction with filename ??? |
A list of ggplots (the length of spatial data frames) - one for each TMA or ROI
Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.