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imdepifit

Example twinstim Fit for the imdepi Data

Description

data("imdepifit") is a twinstim model fitted to the imdepi data.

Usage

data("imdepifit")

Format

an object of class "twinstim"

See Also

common methods for "twinstim" fits, exemplified using imdepifit, e.g., summary.twinstim, plot.twinstim, and simulate.twinstim

Examples

data("imdepi", "imdepifit")

## Not run: 
## reproduce "imdepifit"
myimdepifit <- twinstim(
    endemic = addSeason2formula(~ offset(log(popdensity)) + I(start/365-3.5),
                                S = 1, period = 365, timevar = "start"),
    epidemic = ~ type + agegrp, siaf = siaf.gaussian(),
    data = imdepi, subset = !is.na(agegrp),
    optim.args = list(control = list(reltol = sqrt(.Machine$double.eps))),
    ## the historical default for reltol is 1e-6, which is rather large
    model = FALSE, cumCIF = FALSE
)
stopifnot(all.equal(imdepifit, myimdepifit))

## End(Not run)
surveillance

Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena

v1.19.1
GPL-2
Authors
Michael H<f6>hle [aut, ths] (<https://orcid.org/0000-0002-0423-6702>), Sebastian Meyer [aut, cre] (<https://orcid.org/0000-0002-1791-9449>), Michaela Paul [aut], Leonhard Held [ctb, ths], Howard Burkom [ctb], Thais Correa [ctb], Mathias Hofmann [ctb], Christian Lang [ctb], Juliane Manitz [ctb], Andrea Riebler [ctb], Daniel Saban<e9>s Bov<e9> [ctb], Ma<eb>lle Salmon [ctb], Dirk Schumacher [ctb], Stefan Steiner [ctb], Mikko Virtanen [ctb], Wei Wei [ctb], Valentin Wimmer [ctb], R Core Team [ctb] (A few code segments are modified versions of code from base R)
Initial release
2021-03-30

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