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varPartData

Simulation dataset for examples


Description

A simulated dataset of gene expression and metadata

A simulated dataset of gene counts

info about study design

Normalized expression data

Usage

data(varPartData)

data(varPartData)

data(varPartData)

data(varPartData)

Format

A dataset of 100 samples and 200 genes

A dataset of 100 samples and 200 genes

A dataset of 100 samples and 200 genes

A dataset of 100 samples and 200 genes

Details

  • geneCounts gene expression in the form of RNA-seq counts

  • geneExpr gene expression on a continuous scale

  • info metadata about the study design

  • geneCounts gene expression in the form of RNA-seq counts

  • geneExpr gene expression on a continuous scale

  • info metadata about the study design

  • geneCounts gene expression in the form of RNA-seq counts

  • geneExpr gene expression on a continuous scale

  • info metadata about the study design

  • geneCounts gene expression in the form of RNA-seq counts

  • geneExpr gene expression on a continuous scale

  • info metadata about the study design


variancePartition

Quantify and interpret divers of variation in multilevel gene expression experiments

v1.20.0
GPL (>= 2)
Authors
Gabriel E. Hoffman
Initial release
2020-10-26

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