Example data from the Variant Effect Predictor (VEP).
Description
Example data to use with unit tests.
Format
A vcfR object
Details
vep vcfR object
Output from the VEP may include values with multiple equals signs.
This does not appear to conform with the VCF specification (at the time of writing this VCF v4.3).
But it appears fairly easy to accomodate.
This example data can be used to make unit tests to validate functionality.
Examples
data(vep)
vcfR2tidy(vep, info_only = TRUE)$fix
vcfR
Manipulate and Visualize VCF Data
v1.12.0
GPL-3
Authors
Brian J. Knaus [cre, aut] (<https://orcid.org/0000-0003-1665-4343>),
Niklaus J. Grunwald [aut] (<https://orcid.org/0000-0003-1656-7602>),
Eric C. Anderson [ctb],
David J. Winter [ctb],
Zhian N. Kamvar [ctb] (<https://orcid.org/0000-0003-1458-7108>),
Javier F. Tabima [ctb] (<https://orcid.org/0000-0002-3603-2691>)
Initial release
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