Search synonyms in pubchem
Search synonyms using PUG-REST, see https://pubchem.ncbi.nlm.nih.gov/.
pc_synonyms(
query,
from = c("name", "cid", "sid", "aid", "smiles", "inchi", "inchikey"),
match = c("all", "first", "ask", "na"),
verbose = TRUE,
arg = NULL,
choices = NULL,
...
)query |
character; search term. |
from |
character; type of input, can be one of "name" (default), "cid", "sid", "aid", "smiles", "inchi", "inchikey" |
match |
character; How should multiple hits be handled? |
verbose |
logical; should a verbose output be printed on the console? |
arg |
character; optional arguments like "name_type=word" to match individual words. |
choices |
deprecated. Use the |
... |
currently unused |
a named list.
Please respect the Terms and Conditions of the National Library of Medicine, https://www.nlm.nih.gov/databases/download.html the data usage policies of National Center for Biotechnology Information, https://www.ncbi.nlm.nih.gov/home/about/policies/, https://pubchemdocs.ncbi.nlm.nih.gov/programmatic-access, and the data usage policies of the indicidual data sources https://pubchem.ncbi.nlm.nih.gov/sources/.
Wang, Y., J. Xiao, T. O. Suzek, et al. 2009 PubChem: A Public Information System for Analyzing Bioactivities of Small Molecules. Nucleic Acids Research 37: 623–633.
Kim, Sunghwan, Paul A. Thiessen, Evan E. Bolton, et al. 2016 PubChem Substance and Compound Databases. Nucleic Acids Research 44(D1): D1202–D1213.
Kim, S., Thiessen, P. A., Bolton, E. E., & Bryant, S. H. (2015). PUG-SOAP and PUG-REST: web services for programmatic access to chemical information in PubChem. Nucleic acids research, gkv396.
pc_synonyms("Aspirin")
pc_synonyms(c("Aspirin", "Triclosan"))
pc_synonyms(5564, from = "cid")
pc_synonyms(c("Aspirin", "Triclosan"), match = "ask")Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.