wrMisc: fusePairs – R documentation

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fusePairs

Fuse pairs to generate cluster-names

Fuse previously identified pairs to 'clusters', return vector with cluster-numbers.

fusePairs(
  datPair,
  refDatNames = NULL,
  inclRepLst = FALSE,
  maxFuse = NULL,
  debug = FALSE,
  silent = TRUE,
  callFrom = NULL
)

`datPair`	2-column matrix where each line represents 1 pair
`refDatNames`	(NULL or character) allows placing selected pairs in context of larger data-set (names to match those of 'datPair')
`inclRepLst`	(logical) if TRUE, return list with 'clu' (clu-numbers, default output) and 'refLst' (list of clustered elements, only n>1)
`maxFuse`	(integer, default NULL) maximal number of groups/clusters
`debug`	(logical) for bug-tracking: more/enhanced messages and intermediate objects written in global name-space
`silent`	(logical) suppress messages
`callFrom`	(character) allow easier tracking of message(s) produced

vector with cluster-numbers

daPa <- matrix(c(1:5,8,2:6,9),ncol=2)
fusePairs(daPa,maxFuse=4)

Analyze Experimental High-Throughput (Omics) Data

v1.5.4

GPL-3

Authors

Wolfgang Raffelsberger [aut, cre]

Initial release